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Having perfect links from sources to relays, the diversity order of a JNCC, with m s = m r and with transmission set constructed via Algorithm 1, achieves a diversity order d = 3 using BP-decoding, if, for each u r, Equation (17) can be solved with BP in the case of only one unknown source-codeword vector.
A 'meganuclease', such as I-SceI, that recognizes and cuts longer sequences (18 bp in the case of I-SceI) than those cut by commonly used restriction enzymes.
can be solved with BP in the case of only one unknown source-codeword vector.
According to Corollary 3, a diversity order of three is achieved under BP decoding if, for each u r, Equation (17) can be solved with BP in the case of only one unknown source-codeword vector.
The length of the two chromosome 3 short arms studied is 17,111,432 bp in the case of O. glaberrima and 19,401,704 in that of O. sativa.
Under BP decoding, we obtain what was claimed if, for each u r, the set of L Equation (30) can be solved with BP in the case of only one unknown source-codeword vector s u.
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RIP identifies duplications that are greater than ~400 bp (~1 kb in the case of unlinked duplications) and induces C G to T A during the sexual cycle [ 52, 53].
For the trnL-F region, size varied from 863 bp to 872 bp except in the case of P. polystachion, P. pedicillatum and P. subangustum which showed a length of 811 bp.
We simulated 311 deletions and duplications ranging from 20 bp to 10 kb in the case sample and no CNP in the control sample.
These results demonstrated that our method could be used using Illumina MiSeq reads (2 × 300 bp) as well as Illumina HiSeq 2500 (2 × 250 bp) reads in the case of larger genomes, to drop off the cost.
For example, the recognition sequence of the Type I RM system from C. perfringens ATCC 13124, 5′-CACNNNNNRTAAA-3′ (R = A or G), is similar in structure to that of the predicted CpaAII enzyme (5′-AAGNNNNNCTCC-3′), yet contains a partially-degenerate 5 bp element at the 3′ end, rather than a defined 4 bp element in the case of CpaAII.
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