Sentence examples for bp from the annotated from inspiring English sources

These genes have an E CG) ± 600 bp from the annotated 5'-end in each genome.

Indeed, P-elements are enriched in regions +/- 100 bp from the annotated transcription start sites (TSSs).

Briefly, we (1) retrieved coding sequences (CDS) that were longer than 100 bp from the annotated genomes of A. thaliana and P. trichocarpa.

To investigate 5hmC and nascent RNA levels across genes, we divided the genes into promoter (from -1Kbp to 500 bp around the annotated start site), 3′ end (from −500 bp to 500 bp around the annotated termination site), and gene body regions (500 bp from the annotated start site to −500 bp from the annotated termination site).

The results show a strong correlation between tissue specificity of a gene and the propensity of its promoter to exclude nucleosomes (the promoter region was taken as -1500 to +500 bp from the RefSeq-annotated transcription start site).

We note that gene deserts, regions more than 250,000 bp from annotated genes, are slightly methylation-poor in all tissues, suggesting that methylation is being targeted toward gene-rich areas.

In order to search for each of these distal regulatory regions we extracted up to 50000 bp from the most upstream TSS annotated for the closest gene in human and from each of the corresponding one-to-one orthologous genes in mouse, rat, horse, dog, cow, opossum and chicken.

Here truncated from original format "HM000... .......... Total bps: total length, in basepairs, of the annotated gene.

However, 2482 NTUs mapped >10,000 bp away from annotated exons.

For human and mouse, 10,000 bp upstream and 10,000 bp downstream from the Ensembl-annotated TSS were searched for TFBS hits.

dVariants more than 500 bp away from an annotated gene.