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Thus, 27% of the area interrogated was excluded from the analysis since we do not know the location of the nearest SAR beyond the boundaries of the ENCODE regions.
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In order to include reads mapping to the exon boundaries of the sequence encoding for peptide binding and presentation, we added exon 1 (73 nucleotides long) and 75 nucleotides of exon 4 to the class I reference sequences and 75 nucleotides of exons 1 and 3 to the class II reference sequences.
Boundaries of the genomic islands encoding T6SS were defined by thorough nucleotide sequence analysis.
Beginning with a CSV file containing the locations of art galleries within New York City, as well as a GeoJSON file encoding the boundaries of the five boroughs, the workshop guided participants through the process of visualizing the locations of the galleries in the form of a basic dot map.
A previously unknown cell type in the brain's cortex encodes geometric boundaries of the nearby environment, perhaps providing a frame of reference.
Nature is making all of the ENCODE research freely available, at www.nature.com/encode and through an iPad app.
A CDR3 region was defined by identifying the second conserved cysteine encoded in the 3′ portion of the V segment and the conserved phenylalanine encoded in the 5′ portion of the J segment that form the boundaries of the CDR3.
In order to exclude the possibility that this truncation could occur through alternative splicing, RNA was extracted from WT and HtrA2-KO brain tissue and quantitative real-time PCR was performed using primer pairs designed across each exon boundary of the ATP5A1 gene, encoding the α-subunit (Supplementary Figure 2).
Boundaries of the steppe are imprecise.
The boundaries of the cells were fuzzy.
In our initial polymorphism search, a total of nine single-nucleotide polymorphisms (SNPs) were identified in the whole exon, 5'-flanking, and exon-intron boundary regions of the KCNJ6 gene encoding GIRK2.
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