Sentence examples for boundaries of copy from inspiring English sources

We then integrated breakpoint information derived from the mate-pair reads with information about read depth in order to more accurately delineate the boundaries of copy number alterations.

At the same time, due to a lack of life-cycle inventory data of planting trees, carbon storage was not included in system boundary of copying paper.

In this work, by choosing an initial copy number screening resolution of a probe every 1-2 kb, the boundaries of any copy number variants discovered could then be defined within the range of long PCR, and junction-fragment analysis can be used to establish a rapid, specific PCR assay for the variant.

Half of the score (H53) is based on the combined detection of the 5′ and 3′ terminal motifs within +/− 5 nt of the predicted boundaries of individual copies of the repeat.

Due to differences in the flanking bases at the boundaries of different copies of the multicopy repeat sequence, the same junction may also be described with a different number of overlapping bases or inserted read-only bases at the breakpoint for each of these possibilities.

The IR may restrict rearrangements that cross the boundary of single copy regions, and thus concentrate gene order changes within single copy regions.

This discrepancy is primarily caused by the difficulty associated with precisely defining the boundaries of each repeat copy (Bao and Eddy 2002).

We have defined the boundaries of each IS copy based on data obtained from the annotations of the genomes and from ISfinder database [ 52], but in many cases, there were not available data and we have studied the IS ends by managing multiple alignment data and the meticulous analysis of the sequences.

Because the boundaries of regions with copy-number losses are thought to be responsible for particular genomic breaks, we defined breakpoints as regions encompassed by a pair of probe sets located inside and outside the boundary of the loss.

Differences predominantly concerned the boundaries of corresponding regions with copy number alterations.

We hypothesize that RepeatScout fails to connect TE fragments more than a certain distance apart, thereby sometimes missing the true boundaries of a given TE copy.