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The theoretical possible range for SCLsimijk is between 0 1, where a value of 1 implies that domains di and dj have 100% identical subcellular profiles, and a value of 0 implies that domain di and dj are both predicted to localize into entirely different compartments with a probability of 1.
Arabidopsis RMTases NOP2B and RNMT/FMU are both predicted to localize in chloroplasts [ 26].
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In contrast, 19.2% (23 of 120) and 20.8% (25 of 120) of the interactors were predicted to localize to both the cytosol and nucleus, respectively.
Of these 154 232 genes, 21 27 are predicted (by PSORTb) to localize to the inner membrane and 5 (for both BLAST-RSD sets) are predicted to localize to the outer membrane supporting the idea that at least some have functions associated with the differing external environments encountered by the two strains.
A subset of proteins co-immunoprecipitating with PepD in both M. tuberculosis and M. smegmatis are predicted to localize to the cytoplasmic compartment, raising the possibility that additional interactions may be mediated through this domain.
> GRXs have been predicted to localize in all cellular components except nucleus using prediction software programs.
OsRUS1 and OsRUS5 were predicted to localize to the chloroplast by all six programs used.
The TCM5 protein was predicted to localize to chloroplasts by TargetP (Emanuelsson et al. 2000, http://www.cbs.dtu.dk/services/TargetP/).dtu.dk/services/TargetP/
The ASL3 protein was predicted to localize to chloroplasts according to ChloroP (http://www.cbs.dtu.dk/services/ChloroP/) and TargetP (http://www.cbs.dtu.dk/services/TargetP/).dtu.dk/services/TargetP/
Each threshold % mass accumulation is used to distinguish between those probes that are predicted to localize to mitochondria or lysosomes vs. those that are not.
Among the up-regulated lipases, a number of enzymes were predicted to localize in endoplasmic reticulum which is closely associated to the lipid accumulation organelles, oil bodies.
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