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The study was based on both mt data and directly PCR amplified introns of nuclear genes.
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Two-dimensional (2D) inversion of MT data and gravity models indicate the Wadi Kubbaniya is filled with loosely-consolidated sandstone and conglomerate that extend to a depth of ∼150 200 m into Cretaceous sandstone formations which overlie Precambrian crystalline rocks.
The discrepancy between short branch lengths in phylogenetic trees inferred from mt data and a large extent of morphological divergence can have several explanations.
The mt data set included 4870 and 2728 positions before and after sites of ambiguous positional homology were discarded.
The specific definitions of late-start and overrun categories for the DS and MT data are described in Table 1.
Therefore, we concatenated the nuclear and mt data sets.
Combining the mt data with the nuclear and chloroplast data resulted in a topology identical to that based on mt data only (fig. 5 and supplementary fig. S10, Supplementary Material online).
The MT data of disease-free interval and overall survival were compared univariately and multivariately in Cox regression analysis.
Following the dimensionality analyses, inversion of AMT and wide-band MT data was performed using code developed by Egbert and Kelbert (2012; ModEM).
3, and south of Oita, the MT data were measured with a Metronix ADU07e system (telluric and geomagnetic field observations) and the NT System Design ELOG1K (telluric only observations).
The analyses of all data combined yielded a topology that was identical to that based on mt data only (fig. 5 and supplementary fig. S10, Supplementary Material online).
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