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Type-II refers to amino acids that are highly conserved in both clusters but with very different chemical properties (i.e. positive versus negative charge).
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Type II sites are those that are highly conserved in both clusters but are fixed for amino acids with different biochemical properties between sister clusters, implying these residues are responsible for the functional differences between these groups.
The reads mapped to both strands of these clusters, but with strand-specific differences in their downstream nucleotide composition (Additional file 1 Figure S2).
Most corporate networks are made up of several clusters but with few links between them.
These three yellow color coded SSR tags were found due to their appearance in both species clusters but not well conserved with respect to the assigned conserved ratio.
Additional information about the resistance response could be found by analyzing genes that are modulated in both interactions (Cluster D) but with a peculiar pattern (e.g. earlier or more strongly in the incompatible interaction), or those showing a reverse modulation of gene expression in one or the other interactions (which might reveal specific requirement in each interaction).
A. leucokranos clusters with high posterior probability with A. sandaracinos and hybrid 1 and 3 both cluster with A. perideraion.
The env sequences from both patients clustered with XMLV sequences but were distinct from previously reported XMRV and prototypical PMLV (Fig. 2a).
We compared the maps produced with 7 defined clusters with those produced with 30 clusters as done by COS1.
It is interesting that R. rupicapra cartusiana groups with R. pyrenaica ornata regarding the mtDNA, as both form the Clade mtC, but clusters with its conspecific group R. rupicapra on the basis of microsatellite variation.
Unigene clusters made with both wild emmer wheat Zavitan and durum wheat Svevo HC genes.
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