Sentence examples for both alignment sensitivity and from inspiring English sources

As illustrated in Additional file 2, false alignments are nonexistent when both alignment sensitivity and paralogy sensitivity are low or when both are high.

In terms of both alignment sensitivity and precision, MIQS is balanced compared with existing matrix series, which tended to produce longer alignments, i.e. better sensitivity, with more diverged ones, and which tended to generate shorter alignments, i.e. better precision, with less diverged ones.

For both datasets, HIA is significantly faster than all of the other aligners except BWA MEM and SOAP2 while retaining good alignment sensitivity and precision.

Further, performing multiple iterative rounds of global and local alignment, and perhaps even local reassembly, will benefit the overall alignment sensitivity and accuracy of all methods; however, this is not evaluated here.

We also evaluated alignment quality: the alignment sensitivity and precision of matrices and methods.

The alignment quality is assessed using two standard measures: alignment sensitivity and precision, as described in Section 2.4.

The size of the k-mer is chosen to achieve a good balance between alignment sensitivity and efficiency.

Figure 5A and C shows the alignment sensitivity, and Figure 5B and D shows precision for various sequence identity bins in reference alignments.

Then, the average alignment sensitivity and precision were computed respectively, and were binned by pairwise sequence identity in the reference alignment.

"Hash size" (k-mer length for alignment) and "alignment candidate threshold" (minimal alignment length to map the read) parameters were pre-optimized prior to the analysis with respect to alignment sensitivity and time needed for the analysis.

Regarding alignment sensitivity, in both cases, MIQS and BLOP20 showed comparable performance with the best one, VTML250, over almost the entire range of sequence identities in this test.