Sentence examples for both alignment length and from inspiring English sources

The novel approach used by the M3 module selects several homologues for each query sequence, using a modified Rost equation, which takes into account both alignment length and percentage identity.

The figures for both alignment lengths are similar and present the same trends (slightly better for 600 bp for all methods, as expected), so we let the results on 300 bp for the Additional file 1.

This phenomenon contributes to the difficulty in tailoring the uniformity, alignment, length, and diameter of the fabricated nanowires.

The rapidly evolving ITS rDNA region spanning across ITS1 rDNA and ITS2 rDNA sequences differed by 34% (375 pairwise alignment length) and 37% (314 pairwise alignment length), respectively.

Division by alignment length and subsequent multiplication by 333 allows normalization of the number of events per unit of alignment length corresponding to 1,000 bp of DNA alignment.

Individual index subcategories were also differentially sensitive to increases in alignment length and, therefore, threshold selection.

A data set with relaxed criteria used > 70%% alignment length and > 40 %sequence identity.

For the nuclear data set, there was a clear tradeoff between alignment length and taxonomic coverage.

Individual alignments were parsed by minimum alignment length and concatenated using FasConcat [ 75] for generation of super alignments.

The latter may be due to differences in the examined alignment length and between local and global alignments.

We represent one alignment A between two proteins as a sequence of alignment states, where L is the alignment length and is the alignment state at position i.