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If both alignment methods were able to align a molecule, and their aligned locations were similar (within half the length of the molecule), a consensus was reached, and we included the OMBlast result in our integrated list.
An elaborate dual-triangle optical path design is applied to share one detector for both alignment and view.
Second, mappings between the SAM and TOGAF ADM are provided in order to compare both alignment processes.
Clustering (i.e., grouping of similarly expressed genes) plays a key role in the prediction of cis-motif elements in both alignment and enumerative methods.
While good alignment and consistency are obtained for statistics and invariants at a high Karlovitz number, both alignment and consistency degrade at a low Karlovitz number.
Finally, the expression of type II collagen is enhanced with both alignment and incorporation of the aggrecan mimic, showing synergism between fiber alignment and incorporation of the aggrecan mimic.
The software package PRRN/PRRP uses a hill-climbing algorithm to optimize its MSA alignment score and iteratively corrects both alignment weights and locally divergent or "gappy" regions of the growing MSA.
For both alignment programs, gap opening and extension parameters were set to their defaults.
Similar(3)
For the representation of kinases, we add alignment-based features, then position-specific features, and ultimately both alignment-and position-specific features.
Ward and Bussemaker [22] and Xie et al. [29] suggested using both alignment-based and alignment-independent approaches to identify evolutionary conserved regions.
The algorithm can be run in both alignment-free or alignment-based mode.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com