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Topology searches were performed using the fast bootstrap version of the RAxML program, which analyzes 200 bootstrap replicates.
A bootstrap version of the test is also discussed and its performance is evaluated through Monte Carlo simulations.
Moreover, in comparison with the wild bootstrap "version" of the original Breusch Pagan test (Godfrey and Yamagata, 2011) our experiments indicate that the corresponding version of the heteroskedasticity-robust Breusch Pagan test appears reliable.
Step 2: Calculate the Bootstrap version of the statistic of interest (difference of mortality rate and response time).
In the standard bootstrap version of the particle filter, the number of particles in each mode is determined by the posterior probability of that mode.
The particle filter calculates with each measurement the updated particles { x t ( i ), q t ( i ) } i = 1 N p and their weights { w t ( i ) } i = 1 N p from the corresponding previous particles { x t - 1 ( i ), q t - 1 ( i ) } i = 1 N p and weights { w t - 1 ( i ) } i = 1 N p. A single step of the bootstrap version of the MMPF is summarized below.
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For example, BH's with 1% FDR control and KBIN with K = 1 yield mean (SD) counts of discovered pathways across bootstrap versions of the dataset of 6.8 (2.4).
Totally 100 bootstrap versions of the gene expression data are used in this bootstrapping analysis; the results are summarized in terms of confidence score, which is calculated as the frequency of TFs (shown in Figure 5).
It is the basic counter-story to the Republican myth of the Horatio-Algerist "pull yourselves up by the bootstraps" version of the American Dream.
In addition to the traditional chi-square test, the Bollen-Stine bootstrapped version of the test was performed [ 45].
2. Calculate the bootstrap version of IBMD. 3. Repeat steps 1 and 2 a B times to obtain an estimate of the bootstrap distribution.
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