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MtPH-A6 TPases formed a well supported clade, containing four subclades with high bootstrap values, representing the corresponding subfamilies.
Consensus trees were calculated using the majority rule option in Consense, with node bootstrap values representing the percent agreement between the 100 bootstrapped datasets.
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The bootstrap value represents the support given to the choice of linking a specific query sequence to the ancestor at the root of the immediate subtree.
The bootstrap values represent 2000 replicates.
The bootstrap values represent a percentage of 100 repetitions.
The bootstrap values represent Expected-Likelihood Weights (ELW) of 1,000 local rearrangements.
Phylogeny was determined using the maximum likelihood method with PhyML software and bootstrap values represent 100 cycles.
Bootstrap values represent 1,000 resampled data sets.
Bootstrap values represent 1000 replicates.
Tree inferred in ExaML v1.0.0 under the LG4M+F model; nodal support values represent the frequency of splits in 100 bootstrap replicates.
These values represent the average and standard error of 100 bootstrap replicates (see Methods) and therefore give a reliable picture of the performance differences between the three methods.
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