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Bootstrap values based on 1000 replicates were indicated above nodes.
The number at the branch nodes indicates bootstrap values based on 1000 replications.
The phylogenetic tree was inferred by using the Neighbour-Joining method with the Maximum Composite Likelihood model in MEGA4 program with bootstrap values based on 1000 replications.
Bootstrap values based on 100 re-samplings in ML of the dataset were calculated (TBR, full heuristic search option) [27].
Bootstrap values (based on 1000 replicate data sets) were calculated for the initial tree based on near full length sequences by exporting the alignments to PAUP (version 4.02b; [89]).
We generated bootstrap values based on 1000 resampled data sets.
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The alignment gaps and missing data sites were deleted and a bootstrap value based on 1000 replications was set for all the phylogenetic trees generated in this study.
The scale bar indicates a distance of 0.07, and the numbers on branches indicate percentage bootstrap support values (based on 1000 replications).
Maximum likelihood analysis of the amino acid was run using the MTRev+I+G model with PhyML in Topali, with bootstrap support values based on 1000 replicates.
Phylogenetic analyses of sequences were performed using maximum parsimony and maximum likelihood in MEGA 4 [ 59] under the delayed transition setting and calculation of bootstrap support values based on 1000 replicates.
R-squared 0.80 0.84 Root MSE 0.03 0.03 Notes: 1) z values based on bootstrapped standard errors; 2) significance levels: *** = significant at the 1% level, ** = significant at the 5% level, *= significant at the 10% level.
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