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The remaining 18 variants comprised the second lineage composed of 5 clusters, with strong bootstrap support of at least 3 of them.
All nodes received a bootstrap support of at least 75%.
These genes are direct orthologues to their marsupial and eutherian equivalents, with bootstrap support of at least 99%% for these clades in the phylogeny, with the exception of the CLEC2-like genes.
For multi-clusters where the seed orthologs have a bootstrap support of at least 90% there is a higher agreement with IPC, meaning that the seed ortholog pair also have the highest IPC score, compared to when the bootstrap is below 90% (table 3).
The actual bootstrap support for fold change threshold f, as well as the minimum fold change with bootstrap support of at least b are also included in the IsoDE output to allow the user to easily increase the stringency of the DE test.
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In this analysis, bootstrap support of resampled characters was estimated at variable sequence lengths [14], [41].
Maximum likelihood analysis of COI identified 40 terminal clades with a bootstrap support of 90% or higher and at least 3% average sequence divergence (Fig. 2).
The bootstrap support of this monophyletic group of the tree lies at 56%.
We assessed support for internal nodes with the PAUP bootstrapping procedure and depicted internal nodes with bootstrap support of more than 85% in a phylogenetic tree.
Bootstrap support of (alternative) splits is annotated.
The branch supporting this pattern received bootstrap support of 90%.
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