Sentence examples for bootstrap support estimates were from inspiring English sources
Non-parametric bootstrap support estimates were obtained using 2000 replicates under neighbour-joining using the maximum likelihood substitution model.
RAxML [ 96] version 7.2.8 was used to estimate the maximum likelihood tree under the GTR+gamma model of molecular evolution and bootstrap support values were estimated using 100 rapid bootstrapping replicates.
Parsimony bootstrap support values were estimated through 1000 bootstrap replicates.
Bootstrap support values were estimated using 100 pseudo-replicates.
Bootstrap support values were estimated based on 500 permutations.
Bootstrap support values were estimated using a fast-heuristic search with 100 replicates.
Multiple initial ML searches were performed from random starting points and bootstrap support was estimated for the best ML tree.
Maximum likelihood analyses were performed under the heuristic search with TBR branch-swapping, and bootstrap support was estimated using 1000 pseudoreplicates.
The proportion of invariable sites and the gamma distribution parameter were estimated from the data set and the number of substitute rate categories was set to 4. Bootstrap supports were estimated based on 1,000 replicates generated by the SEQBOOT program of PHYLIP v3.69 (Felsenstein 1989).
Bootstrap support was estimated from 1,000 replicates of simple sequence addition (parsimony) or as-is addition (likelihood) and TBR branch swapping.
Approximate bootstrap support was estimated by applying the Shimodaira-Hasegawa (SH) test with RELL approximation [43] to all local rearrangements around an edge on the topology (also referred to as edge support or LRSH) and 50,000 replicates.
