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This clade is observed across all strategies, with support among non-MDC strategies out of 1000 bootstrap replicates ranging from 858 to 1000.
In general, the number of bootstrap replicates, ranging from 500 to 2000, had little effect on either bootstrap standard error or confidence interval.
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Replicates ranged from three to 30.
As in Figures 7 and 8, the clades { P. chiapensis, P. strobus} and { P. ayacahuite, P. flexilis, P. strobiformis} are generally highly supported across all four gene tree inference methods, with supports among 1000 bootstrap replicates respectively ranging from 610 to 931 and from 858 to 988.
Bootstrap replicates were started from the ML tree.
The extreme outliers are the comparison of each of the bootstrap replicates from the concatenated dataset against the same set of 100 bootstrap replicates.
To test for the influence of including data with very different levels of uncertainty for each species (i.e., replicates of fatty acid composition ranging from n = 1 to n = 244) we employed a bootstrap procedure.
The clade { P. chiapensis, P. strobus} is generally highly supported, appearing for 22 of 24 strategies, with support ranging from 382 to 982 among 1000 bootstrap replicates.
Similarly to Figure 7, the clade { P. chiapensis, P. strobus} is generally highly supported across all six species tree construction methods, with support ranging from 522 to 876 among 1000 bootstrap replicates.
Also, as in Figure 7, the clade { P. ayacahuite, P. flexilis, P. strobiformis} is highly supported across all six species tree construction methods, with support ranging from 579 to 999 among 1000 bootstrap replicates.
We compute a confidence value for putative local solutions derived from bootstrap replicates of the original solution.
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