Sentence examples for bonds were predicted using from inspiring English sources

All possible pairs of residues in the molecular structure of RG13 (PDB ID: 4DXC) were systematically substituted with cysteines, and disulfide bonds were predicted using SCWRL 4.1.

The interfacial bonding was predicted using molecular dynamics (MD) simulations based on a cured epoxy resin model, which was constructed by incorporating three-dimensional cross-links formed during curing reaction.

Presence and connectivity of disulfide bonds in the protein were predicted using the DiANNA v1.1 server [ 76].

Disulfide bridges were predicted using both alternatives of the mature protein (EDBCP = Ensemble-based Disulfide Bonding Connectivity Pattern prediction server).

TMs were predicted using TMHMM Server v. 2.0.

Transmembrane domains were predicted using TMHMM42.

Functional areas were predicted using PROSITE.

RNA secondary structures were predicted using RNAfold.

The shear bond strength of masonry is predicted using masonry triplet.

The bond behavior of epoxy-coated rebar embedded in two different ultra-high performance concrete (UHPC) mixtures is experimentally investigated by a uniaxial pullout test, and the effect of embedment length, side cover, and mixture type on the bond stress-slip relationship is predicted using a double-phase analytical model.

The hydrogen bonding pattern between the β-strands of the TtOmp85 barrel was predicted using an empirical energy function.