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The SHAKE algorithm [37] was applied to constrain all hydrogen-heavy atom bonds to remove the need to sample the high frequency vibrations.
ARGs catalyze the hydrolysis of glycosidic bonds to remove ADP-ribose moieties conjugated to side-chains of particular residues in proteins by ADP-ribosyltranferases [ 59, 60].
To strip a bond is to remove its interest-paying coupons and sell the principal of the bond separately.
In the original algorithm for structure diagram generation [2], after generation of the initial 2D atomic coordinates, bond rotations were performed to remove overlapping.
This can weaken the adhesive bond, making it easier to remove the battery.
After the correct configurations of all the stereo double bonds are established, their relative coordinates are held fixed while other bonds are allowed to rotate to remove overlap of atoms and bonds.
The bond failure occurs when the amount of energy required to remove the bonds across a unit surface equals the critical energy release rate of the interface between the two layers.
Bond 23 action sequence rewritten to remove Indian commuters from roof of train.
In fact, one can readily achieve lower-energy conformations of a given chemical structure by performing an all-atom energy minimization to remove any bond, angle, or torsion strain present in vacuo.
That bond is now being recalibrated to remove some of the pork required to pass it at a time before the historic drought California now finds itself in.
The atomistic lipids were then energy minimized to refine bond lengths and angles and to remove any clashes that resulted from the conversion (see Figure S4 of the Supporting Information).
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