The longest block was detected on OAR10 with a length of nearly 500 kb for all populations except for BL for which the longest haplotype block was on OAR21 (~500 kb).
Recently, five microsyntenic blocks were detected between a region on potato chromosome 5 harbouring a QTL for resistance to late blight and root cyst nematodes, and A. thaliana chromosomes 1, 3 and 5 [ 35].
Four QTL, two on A2 (qPL1 in R block and qPL2 in W block) and one each on LG A6 (qPL3) and A10 (qPL4 in R block) were detected for petiole length.
Within LAMB3 (FM872309), 15 SNPs distributed on seven linkage-disequilibrium blocks (Table S1) and within LAMC2 (five2310), five SNPs within four linkage-disequilibrium blocks were detected and analysed (Table 1).
Additionally, terminal blocks were detected in the Ch.
Synteny gene blocks were detected with OrthoCluster [ 41].
For siliqua beak length, five QTL were detected, one each on A3 (qSBL1 in the J block), A4 (qSBL2 in the N Block), A5 (qSBL3 in the C block), A7 (qSBL4 in the E block), and A9 (qSBL5 in H block).
Four smaller but equally significant linkage disequilibrium blocks of 3.5−35.5 kb were detected on chromosomes 1, 2, 9, and 10.
(E – H ) Relatively smaller blocks of chromatin changes were detected on HLHm7, gogo, pros and tup genes.
