Sentence examples for block substitutions from inspiring English sources

small sequence changes (SNVs, indels, block substitutions).

We classified SNVs, small indels and block substitutions as small sequence changes (SSCs).

We further grouped individual variations as small sequence changes, (SSCs SNVs, indels, block substitutions), copy number variants (CNVs) or structural variants (SVs).

These variants included single nucleotide variants (SNVs), indels and block substitutions as well as larger variants classified as CNVs and SVs that were called in comparison to reference sequence (NCBI Build 37).

The results show that each genome harbors 3.3 to 3.9 million single nucleotide variants (SNVs), 370 430 thousand indels (small insertions and deletions), 71 80 thousand block substitutions, 1 thousand structural variations, and 150 copy number variations as well as a transition/transversion ratio of 2.1.

Lastly, in the functional mode (fast simulation), our simulator produces values for hit ratio5, number of block substitutions, and network bandwidth demanded in each round of service, as well as other more detailed information (if requested by user), such as system debugging data.

This approach validated 104 SNVs, 4 indels and 1 block substitution.

To analyze the probability of specific amino acid substitutions Blosum62 (BLOck SUbstitution Matrix) scores were obtained [ 13].

In each haplotype, the existing variants were reformatted into one single block substitution and annotated with the selected annotation tool.

The large InDels (>50 bp) and the majority of block substitution InDels have been submitted to EVA database (provisional accession number PRJEB9374; http://www.ebi.ac.uk/eva/).ac.uk/eva/

In situations when a block substitution spans across an intron/exon boarder, the non-coding part is excluded from subsequent functional prediction.