Sentence examples for blast in dbEST to from inspiring English sources

> Using Ensembl, we randomly selected 34 non-overlapping genes on the mouse chromosome 4, and used BLAST in dbEST to find ESTs that matched, producing in total 2294 ESTs.

Next, we mapped all available murine and human ESTs in dbEST to the murine and human Jmjd6/ JMJD6 loci, respectively, using the program e2g.

However, our initial analysis of HML-2 specific ESTs clearly shows that there is insufficient information in dbEST to comprehensively describe HML-2 proviral expression patterns.

BLAST searches in dbEST, assembly of ESTs and editing of consensus sequence was performed using Autoassembler program (ABI).

Yu et al. [ 3] analyzed the NCBI EST database (dbEST) to select a set of human genes that are preferentially expressed in a tissue of interest.

The resulting sequences were annotated by comparison to the protein non-redundant database (UniProt - [60]) using BLAST and submitted to dbEST [61].

They have been also deposited in dbEST (accession numbers CU357053 to CU361296).

To examine the error rate in dbEST sequences from NCBI, the same criteria described above were applied to parse the BLAST output.

refers to ESTs found in dbEST database which typically showed query coverage and percentage of identity above 90%.

The data present in dbEST is not well annotated with regard to the precise origin of the source tissue used in cDNA library construction.

The entire EST data was deposited in dbEST of NCBI under the accession numbers from ES986411 to ES999999 and EV000001 to EV009938.