Exact(3)
The mapping coordinates, Blast description, coverage and SNPs identified for the 2482 Novel Transcriptional Units are provided in Additional file 8: Table S6.
The third class included predictions that fulfilled the BLAST result conditions with at least one domain from the InterPro or Pfam database corroborating by the consensus BLAST description.
Fourteen genes were selected for validation by qPCR based on the specificity of their top blast description and previous association with glyphosate resistance in other weed species.
Similar(57)
Candidate genes were selected following queries performed to our database using distinct search descriptors based on BLAST hit descriptions; GO descriptions; Interpro descriptions, GO and Interpro identification numbers.
Candidate genes were selected following queries performed to the pyrosequencing database using distinct search descriptors based on BLAST hit descriptions, GO descriptions, Interpro descriptions, GO and Interpro identification numbers.
The full catalogue of Torvum genes including Blast2GO annotations and complementary information (i.e. blast hit description for transcripts below Blast2GO annotation threshold) are available in Additional file 5, while the full set of Torvum unigene sequences (ID of contigs plus singletons and transcript sequences) is provided in fasta format in Additional file 6.
For a given group of contigs, selected by GO terms ID or by keywords search on contigs and BLAST hits descriptions, a customizable.tsv file can be retrieved with data regarding contig ID, description and sequence as well as associated GO IDs and terms.
Television networks aired pictures of Anderson, radio stations blasted a description of her, while roadside marquees displayed the color and license plate of DiMaggio's Nissan.
Top hit BLAST hit descriptions for each transcript are shown.
Moreover, for each UniProt ID, taken from Blast-X description field, we associated specific Gene Ontology annotation, that integrates information about process, function, and component.
The best BLAST hit descriptions of differentially expressed transcripts in 'Veyo' and 'Falster' are shown in Additional files 4 and 5, respectively.
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