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Monomeric homing endonucleases of the LAGLIDADG family recognize DNA in a bipartite manner, reflecting the underlying structural assembly of two protein domains (A and B) related by pseudo 2-fold symmetry.
A new feature of MetVis is the visualization of RS by edges connecting metabolite pools and reactions which are represented by nodes in a bipartite manner.
These show that the THAP domain interacts with its binding sequence in a bipartite manner, through the major and minor grooves of the DNA.
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We are the first to consider the multiple different data chunks forwarding optimization in the broadcast manner, an algorithm solving the bipartite matching with communication and storage capacity for data chunk, and relay vehicle assignment is proposed.
The analysis of the cooperative locality of the codes obtained in this manner is based on the fact that the underlying bipartite graph has high girth.
The seemingly contradictory results reported by the above three groups can be resolved if we assume that β-cat and the bipartite transcription factor β-cat/TCF exert different functions in a precise dosage-dependent manner at different developmental stages of the pancreatic islets.
We show that the LANA homologs of KSHV and the macaque RFHVMn have a conserved classical bipartite kr-NLS that binds to multiple importin α isoforms in a RanGTP-insensitive manner and induces nuclear localization of a large heterologous protein, 2×EGFP (see Fig. 10).
We use a local search approach to the pairwise PPI network alignment problem in a manner similar to 2-Opt as follows: when given a maximum weighted bipartite mapping in, we define a vertex subset for each, which consists of the c highest-weighted neighbors of x in Y (where the weight of a neighbor of x is given by its sequence similarity to x).
Alternatively, since OS9 and SEL1L form a complex in plants and SEL1L orthologues can bind to misfolded proteins in a glycan-independent manner [ 10, 40, 42, 43], OS9 and SEL1L might together decode the bipartite signal and associate with SUBEX-C57Y.
Given the bipartite graph ({mathcal G}), we obtain a code ({mathcal C}) (over (mathbb {F}_{q})) in the following manner: We assign each edge in the bipartite graph (mathcal {G}(mathcal {V},mathcal {E})) with a code symbol in the codewords of ({mathcal C}).
Here, we applied a thorough statistical analysis not only to bipartite but to a multipartite graph consisting of microRNAs, proteins, diseases, and signaling pathways in a tissue-specific manner and uncovered the impact of disease-associated microRNAs on human signaling pathways.
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