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The resulting clusters were then functionally annotated to identify enriched biological pathways and functions using DAVID24, and the first principal component from each cluster was extracted for further analyses.
In addition to previously known categories of inducible genes, our pathway analysis revealed that Spt5 target genes belong to diverse biological pathways and functions.
To identify biological pathways and functions enriched in our significant genes, we conducted gene ontology and pathway analyses with the set of genes that presented whole-gene expression changes and/or isoform differences between the tumor samples using the Ingenuity Pathways Analysis (IPA version 6.0) software package (Ingenuity Systems, Mountain View, CA).
Pathway mapping methodologies were used to assess the extent of coverage of biological pathways and functions.
Since its first introduction in 1995, KEGG PATHWAY has been widely used as a reference knowledge base for understanding biological pathways and functions of cellular processes.
In addition, stage-specific, differentially expressed genes were identified that were involved in numerous biological pathways and functions including calcium signalling, sphingolipid metabolism and parasite defence.
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Fei Chen, a Broad Institute Fellow who is also a research affiliate at MIT's McGovern Institute for Brain Research, has pioneered novel molecular and microscopy tools to illuminate biological pathways and function.
The linkage of coordinately overexpressed genes with a small group of miRNAs (namely miR-30b/c, -195 and 200a) formed the rationale for informatics-based analyses to explore the relationship of these genes and miRNAs in terms of biological pathways and function.
We present a method for analyzing microarray data that is predicated on biological pathway and function knowledge as opposed to a purely data-driven initial analysis.
The current version of KampoDB contains 42 Kampo medicines, 54 crude drugs, 1230 constituent compounds, 460 known target proteins, and 1369 potential target proteins and has functional annotations for biological pathways and molecular functions.
The current version of KampoDB contains 42 Kampo medicines, 54 crude drugs, 1230 constituent compounds, 460 known target proteins, and 1369 potential target proteins, and has functional annotations for biological pathways and molecular functions.
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biological roles and functions
biological pathways and networks
biological functions and functions
biological effects and functions
biological pathways and events
biological pathways and delineates
biological structures and functions
biological properties and functions
biological pathways and mechanisms
biological targets and functions
biological pathways and modulates
biological features and functions
biological interactions and functions
biological pathways and genes
biological mechanisms and functions
biological activities and functions
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