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The notion of tree-thinking can be inconsistent with everyday thinking about biological groups and their relationships (Cobern et al. 1999).
Scaffold was used to generate P-values for proteins based on quantitative information in biological groups and replicates.
This pair was also selected by NormFinder as the most stable reference gene set for normalizing exosomal miRNA in the two biological groups and 4(d)).
To minimize the impact of batch effects, an ideal experiment design should ensure the even distribution of biological groups and confounding factors across batches.
To minimize the impact of batch effects, a careful experiment design should ensure the even distribution of biological groups and confounding factors across batches.
Clustering analysis showed that major differences exist between the two biological groups and that technical replicates cluster together even before any normalization, as evident from multidimensional and hierarchical clustering (Fig. S1A and B).
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He argued against grouping strepsirrhines with Insectivora (a now-abandoned biological grouping) and noted that the brain had features transitional between other primates and "inferior" mammals such as bats and carnivorans.
The aligned images were grouped to reflect the biological grouping and were used to generate a reference (master) image with 1037 spots using the Progenesis SameSpots software.
Data were normalized by performing total spectral count normalization by standardizing to the total spectral counts for all proteins identified in each biological group and replicate.
All three batches contain samples from each of the two biological groups (disease and control).
But both bacteria (=prokaryotes) and eubacteria are important concepts and biological groups despite their paraphyly and are in principle acceptable as taxa.
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