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As we are aware that the artificial data set may not fully represent the complex structure of a true biological data set we also assess the different statistics on a ChIP data set from Wei et al. [21].
The outcome of each simulation run was compared to a biological data set to test which one of the two models would be more likely to reflect NK cell education in vivo.
Ondex [ 47] a client application that integrates and visualizes biological data set.
JGB conducted experiments on biological data set and contributed to the writing of the paper.
The first biological data set comes from intracellular signalling in plant-microbe interactions.
We also apply our algorithm on biological data set from chromosome 20 from HapMap data bulk (http://www.hapmap.org), respectively.
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As expected, our biological data sets exhibited substantial deviation within individual image stacks (Figure 4).
It is possible for us to utilize databases containing biological data sets to explore how pathways are organized.
However, we expect that for many general high-dimensional biological data sets this model will be useful and can provide novel insights.
In order to fully understand the relationship between yeast's genome and its physiology, the stockpiles of diverse biological data sets that describe its cellular components and phenotypic behavior must be integrated at the genome-scale.
As we have seen from the biological data sets used for our experiments, it is very common to have largely interlinked sequences, i.e., where one unique clustering and/or maximal clique does not exist.
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