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The proportions of differential biological processes in each module were computed.
Finally, GO functional enrichment analysis was performed to determine enriched biological processes in each community.
Cytoscape was used in order to get a comprehensive overview of enriched Biological Processes in each individual sample group.
Furthermore, the number of downregulated biological processes in each cell line increased with time, while the number of upregulated processes decreased (Fig. 1, bottom charts).
In Table 5, we summarize the result of querying the PANTHER database for significant biological processes in each cluster in irradiated samples.
This GO information was used to identify overrepresented biological processes in each transcriptome and in each group of d.e.g. by tissue.
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The analysis described above and the results given in Figures 1, 2 and 3 and in Figures S2-S5 ranks the difference between the protein set responsible for a given biological process in each organism and the corresponding set in S. cerevisiae.
Column 2* reports the most significantly enriched GO biological process in each module that has the smallest p-value.
Active genes, which are targets of each transcription factor, reveal important biological processes in the epididymis epithelium.
Introduction to chemical and biological processes in the aqueous environment.
Protein kinases have been reported to play critical regulatory roles in various biological processes in plants11,49,50.
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