Sentence examples for bioinformatics pipeline based on from inspiring English sources
Finally, an automated bioinformatics pipeline based on our stepwise procedure is currently being developed and will be available to other projects that may benefit from this genotyping approach.
This data-rich approach, combined with a bioinformatics pipeline based on freely available computational tools, enabled the entirety of the selection process and not only its endpoint to be characterized.
Following the objective of this study − to analyze the choices that each CGC made to reach a genetic diagnosis for nine patients − the results do not comprise a performance comparison of sequencing platforms or bioinformatics pipelines based on technical parameters.
A custom-made bioinformatic pipeline based on Perl and Python scripts was developed for the definition of homology relationships of C. hamatus transcripts (fig. 1 A).
Bioinformatic screening of the sequenced DNA used a data pipeline based on freely available software, with the exception of enrichment analysis, which used a Python program written in-house.
We used the CNV calling pipeline based on the previous study [ 29] with a small change.
To construct multiple alignments, we suggest a progressive alignment pipeline based on the pairwise SPARSE algorithm.
In particular, several new bioinformatics analytical pipelines based on graph theory were proposed to analyze the enormous NGS data from large number of individuals.
Data management and analysis pipelines, based on bioinformatics expertise and hardware infrastructures, have been developed to manage the massive sets of data produced by NGS.
Our bioinformatic analyses, using variant discovery pipelines based on GATK [ 22], revealed several hundred thousand putative high quality variants within our capture region, demonstrating the power of exome sequencing.
In a recent paper [12] we proposed a bioinformatic pipeline, mainly based on an ab-initio sequence analysis for a genome wide study of this class of mixed FFLs.
