Sentence examples for bioinformatics databases such as from inspiring English sources

The UniProtKB provides links to at least 126 specialized resources including plant bioinformatics databases such as The Arabidopsis Resource (TAIR), 45 Gramene, 46 and EnsemblPlants.

Many bioinformatics databases, such as UniProt [ 9] and PDB [ 10], are associated with file formats that can be parsed by software that analyses or displays the data from the database.

In principle, 1-propanol should be detected in WT2, since bioinformatics databases such as BRENDA [ 20] report that certain E. coli ADHs also possess affinity for either propionyl-CoA and/or propionaldehyde as potential substrates.

However, bioinformatic databases, such as Pfam (Finn et al., 2014), place the LIC in the same family as Ras-like, GTP-binding proteins.

We explored all signals with "suggestive significance" (P-value ≤ 10E-5) useveralveral online bioinformatics tools and databases, such as SCAN (http://www.scandb.org/) [ 25], and WGAViewer (http://compute1.lsrc.duke.edu/softwares/WGAViewer/) [ 26].

Databases such as Bioinformatics for Food Safety (Gendel, 1998), Food Allergy Research and Resource Program (Hileman et al., 2002) and International Union of Immunological Societies IUISS) Nomenclature Sub-Committee Allergen Database (King et al., 1994) are rich in content but contain different subsets of allergen sequences.

Despite the importance of cooperative interactions in regulating biological molecular systems, they are currently not adequately captured in bioinformatics resources, for instance, interaction databases such as IntAct (26), the Database of Interacting Proteins (DIP) (27) and the Molecular Interaction database (MINT) (28), but also pathway databases like Reactome (29).

To overcome these limitations, further refinement of GO classifications for the Oct4 correlated genes was performed by manual curation of a wide variety of databases such as NetAffx, GeneCards, Ensembl, Stanford Source, Bioinformatics Harvester, and PubMed (Supplemental Table S2).

Today's bioinformatics resources, including fully sequenced, annotated genomes, and relational databases such as Gene Ontology, help illuminate the biological relevance of coincident changes in expression of many individual genes.

We collected data on COX-2 polymorphisms from publicly available databases, such as dbSNP [ 38], UCSC Genome Bioinformatics [ 39], and GeneCards [ 40].

DriverDB (http://ngs.ym.edu.tw/driverdb/) is a database which incorporates 6079 cases of exome-seq data, annotation databases (such as dbSNP, 1000 Genome and Cosmic) and bioinformatics algorithms dedicated to driver gene/mutation identification.