Sentence examples for biodiversity of the sample from inspiring English sources
Rather, the increase of the number of identified strains highlights a deficit in sampling the real biodiversity of the sample.
The task of operon and pathway reconstruction is made even more complicated since genomes are known to have gaps in the commonly used pathways [ 52] and even if in metagenomics many bacterial species are present, the coverage on the genome is usually inversely proportional to the biodiversity of the sample, the higher the biodiversity the lower the coverage.
Besides, the alpha microbial biodiversity of the 15 samples was estimated by calculating Chao1 richness estimator, and indexes of ACE (abundance-based coverage estimator) and Simpson.
Thus, we present here an algorithm and tool which allows assessment of the biodiversity of a metagenomic sample, as while also providing a means for quality control of NGS analysis pipelines to detect contamination present in sequence reads.
To ground truth the side-scan sonar data and make an inventory of the biodiversity of the observed habitats, a multi-method sampling approach (box corer, SCUBA airlift sampler and visual transects, drop-down camera) was used.
In order to evaluate the eukaryotic biodiversity of samples, libraries were prepared from amplicons generated by the amplification of the V9 region of the 18S rRNA gene.
The integrative approach undertaken in this paper was thus essential for the recognition of the real biodiversity in our sample of morphs of the P. apicalis species complex.
Next-generation-sequencing (NGS) technologies combined with a classic DNA barcoding approach have enabled fast and credible measurement for biodiversity of mixed environmental samples.
The biodiversity index of each sample was calculated using the non-parametric Shannon algorithm and the bile aspirating samples were found to have a significantly lower diversity index (p = 0.0079) than the non-bile aspirating samples (Fig. 2a).
Six positions on the origin and biodiversity of life were identified in the sample.
