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We tested whether m is explained only by the estimated error rate, given X by binomial testing for each cytosine residue, by following the method described by Lister et al. [ 47].
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The 95% confidence interval and p-values resulted from the binomial test for each case are given in the table.
Each list is compared to the reference list (NCBI M. Musculus genes) using the binomial test for each biological process term.
We have performed two-tailed binomial test for each pair of homoeologous genes differing in expression.
Each list was compared with the reference list, using the binomial test for each molecular function, biological process, or pathway term in PANTHER.
For PANTHER the P-value listed is calculated by the program using the binomial test for each category with a Bonferroni correction.
The NMD candidate list was compared with the all the genes used and the P values were determined using a binomial test for each functional category.
Asterisks indicate significant (P ≤ 0.05) deviation from chance according to two-tailed binomial test For each subject, we used 36 containers.
As shown in Table 1 the proportion of ancestral alleles was less than HapMap and neutral theory expectations (p-value < 0.0001, binomial test for each comparison).
Criterion was defined as three consecutive sessions in which performance in free-choice trials was significantly greater than chance, as judged by a binomial test, for each trial type [e.g. 11].
This tool uses the binomial test for each molecular function, biological process, or pathway term in PANTHER, to statistically (p < 0.05) determine over- or under-representation of PANTHER classification categories.
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