Sentence examples for binding sites were assigned from inspiring English sources

Except for one sequence all possible binding sites were assigned to non-coding regions.

Therefore, 146 major Atf1/Pcr1 binding sites were assigned to the probable promoter of the total of 158 genes.

The external dataset defined by Hajduk et al. [27] contains 72 proteins, of which 35 binding sites were assigned as druggable and the remaining 37 sites as non-druggable, based on whether high-affinity druglike binders could be found in the literature.

All LRH-1 binding sites were assigned to nearest genes based on the Mus musculus NCBI m37 genome assembly (mm9; July 2007).

Sequence positions except the binding sites are assigned by searching for a base sequence that will fold into the target structure designed in the previous step using RNAinverse[28] or RNAdesigner from RNAsoft[31], with a non-binding pseudo-base (N) being assigned to all positions in the binding region.

In particular, all the annotated (resp. non-annotated) binding sites are assigned a higher (resp. lower) binding probability than without conservation data.

Each of the top 2,000 emergent MLL4 binding sites was assigned to its closest transcription start sites (TSS).

Identified p53-binding sites were annotated and the locations of p53-binding sites were assigned to RefSeq genes [22].

To this end, 89 Sty1-recruited Atf1/Pcr1-binding sites were assigned to 101 genes (see Materials and Methods) (Table S8).

A binding site was assigned as soon as it matched the pattern.

When only one gene was located in an appropriate orientation, the binding site was assigned to this gene.