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However, we demonstrate here using ψ analysis with engineered metal ion binding sites that the transition state is extensive, containing the entire four-stranded β sheet.
It is through the two binding sites that the inhibitor A4 holds the Chain-1 tightly with its adjacent Chain-2 of the tetrameric M2 proton channel.
Furthermore, T-KDE identified additional 4,237 constitutive CTCF binding sites that the motif-based approach failed to detect.
In addition, T-KDE also identified additional constitutive CTCF binding sites that the motif-based approach failed to find due to lack of apparent motif sites in the ChIP-seq peaks.
The values of S p and Sbs can be calculated using the logarithmic equation: S〈 p,bs〉(n) = log m +1(n), where n denotes the number of publications describing the miRNA gene interaction or the number of binding sites that the miRNA has in the 3′ UTR (untranslated region) of the gene.
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However, the LTR contains two other Sp binding sites that bind the Sp factors shown to recruit HATs to the LTR.
In this respect, the terR promoter contains two putative AreA binding sites that match the HGATAR consensus (BS1and BS2; positions −59 and −72 relative to the translational start point).
The purpose of this study was to investigate, in human skin, the possible existence of specific binding sites that mediate the protective action of resveratrol.
Previous experiments identified functional SOX9 binding sites that control the activity of chondrocyte-specific transcriptional enhancers in the Col2a1, Col11a2 [10], Aggrecan [12] and Cdrap [11] genes.
10 Most enriched DNA motifs found within the 500 bp regions on either side of CUX1 binding sites that contain the ATCRAT CUX1 consensus.
We selected binding sites that passed the P < 0.005 cutoff and did not apply any filter based on evolutionary conservation.
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