Sentence examples for binding sites as shown from inspiring English sources

MSP analyses used the primers for the –144 to –38 bp (MSP1) and −6 to +94 bp (MSP2) regions in RASSF1A promoter, as well as exon1 and −156 to +1 bp region in the BLU promoter designing at putative E2F1 binding sites as shown in Fig. 1A.

From this analysis, 11 deregulated mature miRNAs in 2102Ep cells and 12 in NTera-2 cells were found to have proximal SOX2 binding sites as shown in Table  3.

By considering only high-scoring sites we obtained a significant enrichment in TFAP2A-modulated genes compared with total binding sites, as shown by the p-values in the last column (exact Fisher Test).

Intersection of all three types of software shows that 2 miRNA binding sites shared common binding sites as shown in Figure 9. Three miRNA found to be involved in two binding sites are hsa-miR-mit3, hsa-miR-mit4, and hsa-miR-mit6.

It apparently binds to the high-affinity Asc binding site as shown by Rocklin et al. (2004).

Moreover, the lowest-energy conformers of the six hit fragments are not observed in the same binding site, as shown in Figure 4. Therefore, the docking experiments do not indicate if the six fragments detected as ligands in the NMR screening bind into the same binding site and if so, which binding site it is.

A nucleotide participating in any of the interactions of three types were classified as a binding site as shown in Figure 1.

Instead of searching for the position of one binding site, as shown in Fig. 3B, positions of two or more putative sites will be optimized to achieve similar pattern distribution between simulated amplicons and experimentally-detected amplicons.

The degree of blue shift in DAUDA fluorescence emission (from 543 nm in buffer to 480 nm) indicates Na-FAR-1 has a highly apolar binding site, as shown for other members of the FAR protein family [ 10].

Binding of the substrate UDPGlcNAc requires a twisted conformation at the GlcNAc-phosphate glycosidic linkage, in order to access the GlcNAc binding site, as shown in Figure 3A, and in several cases the docked proline substituent was found not to lie in the GlcNAc binding site.

Characterizing the selectivity for other divalent cations can provide insight into the composition of a calcium binding site, as shown in previous studies of the cation binding sites involved in the activation of BK channels (Zeng et al., 2005; Zhou et al., 2012).