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Binding site overlap analysis indicate a large fraction of the total ZNF217 binding sites are shared by ERα, GATA3, and FOXA1 in asynchronous MCF7 cells.
These results indicate that Cry2Ab binding sites are shared with Cry2Ae, but not with Cry1Ac.
In addition, many transcription factor binding sites are shared among families of transcription factors, complicating analysis.
The two nucleotide binding sites are shared between the large N- and C-terminal nucleotide binding domains.
We found that a higher proportion of Rxrα binding sites are shared with Rnap2 than with Ctcf in all tissues examined (44.8% vs. 6.7% in liver, 42.5% vs. 14.1% in brain, 72.5% vs. 32.9% in small intestine, 48.5% vs. 1.4% in skeletal muscle).
We previously showed that more than 60% of RUNX1/ETO binding sites are shared with RUNX1 in the bulk population of cells (Ptasinska et al., 2012), with many of the footprinted sites containing multiple TGYGGT RUNX1-binding motifs (e.g., Figure 1B).
Similar(54)
We found that only 12 out of the 61 divergent intergenic binding sites were shared by the two divergent protein-coding genes.
A significant fraction of TR4 binding sites was shared among cell types.
This was most pronounced for FLI1 where only a few binding sites were shared between the two cell types.
In female liver, less than 15% of STAT5 binding sites were shared with any other STATs in different cell types.
We demonstrate that the pulverization strategy generates high-quality data and is highly reproducible, with more than 75% of binding sites being shared across all biological replicates.
More suggestions(18)
binding sites are assessed
binding sites are extracted
binding sites are considered
binding sites are characterized
binding sites are found
binding sites are represented
binding motifs are shared
binding sites are arranged
binding events are shared
binding sites are identified
binding sites are given
binding sites are maintained
binding sites are assumed
binding activities are shared
binding sites are located
binding sites are underrepresented
binding sites are presented
binding sites are used
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