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Initially, the two Csk binding sites are designated as segments EPIYA-A and –B, and the Src homology 2 (SH2) domain of Src homology 2 phosphatase (SHP-2) binding sites in Western and East Asian type CagA are designated as segments EPIYA-C and –D, respectively.
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A set of the overlapping 146 major∶major Atf1/Pcr1 common binding sites were designated as the major Atf1/Pcr1 (common) promoter binding sites (see Table S3).
The six other binding sites were designated A through F and localized near but not within, regions on chromosome 8 that are associated with breast, colon and prostate cancer risk (Figure 1A, B) [25].
The two undecanucleotides (11-mers) corresponding to the XerC and XerD binding sites were designated in this study as dif XerC and dif XerD, respectively, whereas the central hexanucleotide between the two Xer binding sites was named as dif cent (Figure 1A).
The four different binding sites were designated A, B, C, and D (A and B on the N-terminal domain, C and D on the C-terminal domain, with no sequential order being implied within the domains).
The TRANSFAC predictions of transcription factor binding sites were designated in the pre-clustering file by the value representing the median-centered mean fold change expressed as the Log2 of the ratio of each sample to the reference for each gene.
These sites are designated binding motif 1 (BM1), and binding motif 2 (BM2), and are separated by between 11 32 amino acids in Arabidopsis [ 8].
A new AE point for these three sites was designated.
The site was designated a UNESCO World Heritage site in 1978.
The site was designated a National Natural Landmark in 1965.
In 1947 a new village site was designated nearby.
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