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To further address the question which of the transcription factors were more likely to be affected by hypomethylation in these regions, we compared our DMRs to known in vitro ZNF263, EGR1, and SP1 binding sites acquired from previous chromatin immunoprecipitation experiments in cell cultures posted within the Encode project.
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Transcription factor binding site sequences were acquired from the Transcription Factor Database (TFD) [ 20].
The site was acquired from the Princeton HealthCare System when the building was vacated in late 2010.
The site was acquired from a consortium of investors, which includes Bessemer Venture Partners.
The acquisition also includes Rotten Tomatoes, a movie review site Flixster acquired from News Corp. last year.
Transcription factor binding site motifs and motif classes were acquired from the TRANSFAC 7.0 Public database [ 31].
Account data acquired from Site A is used on Site B in an attempt to gather or steal financial information.
The protein binding microarray (PBM) data is acquired from [ 5].
g, Motifs identified within BCL11A binding sites from BCL11A ChIP seq in HUDEP-2 cells.
(B) A conserved SigB binding sites were found from 29 TSSs (p-value of 1.51 × 10−8).
Watanabe, Y. H., Motohashi, K. & Yoshida, M. Roles of the two ATP binding sites of ClpB from Thermus thermophilus.
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