Sentence examples for binding site returned from from inspiring English sources

We calculate the match score for each putative binding site returned from the basic algorithm.

A range of average precisions as a function of the average recall is obtained by sweeping through different values of c. Putative binding sites that are significantly overrepresented in the upstream regions of the genes returned in a hit list returned by the MSGR are identified by scanning matrices representing 341 human binding site models taken from release 7.2 of the TRANSFAC database [ 43].

Mutated plasmids were constructed to contain two mutated seed sequences for miR-26a and miR-30c (from ACTTGA to GACGTC for the miR-26a binding site and from TGTTTAC to GACGAGT for the miR-30c binding site).

Another freely-accessible web server for binding site annotation GalaxySite [31] combines binding site information from known proteins with molecular docking to predict ligand binding amino acid residues.

The binding site arrangement obtained from this investigation was validated by mutagenesis and used to predict the binding modes of six other ggTas2r1 agonists.

That binding site is different from the one reported here.

The occurrence of the Gal binding site is apparently independent from the binding profiles of GI NoVs.

The GlcNAc was released transiently and then returned to the binding site during the simulation (Figure 5c d).

The transporter must be able to undergo a conformational change when not bound to either substrate, so as to complete the cycle and return the binding sites to the side from which driving and driven substrates both move.

Results from tests with three protein-ligand complexes indicate that our algorithm is able to detect energy barriers around the true binding site that distinguish this site from other predicted low-energy binding sites.

For this, the best two complexes with minimal Einter at each binding site of 14-3-3ε 14-3-3ε 14-3-3εrom each computation.