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In contrast, TRAF6 did not interact with any of the fusion variants, despite the presence of the TRAF6 binding site associated with the second Ig-like domain (T6-Ig) of MALT1 in M7A8 and M8A8.
A constitutive CTCF binding site, associated with a DNAse I hypersensitive region, termed MINE MYCC insulator element), is able to act as an insulator in stably transfected cell lines [7].
The binding site associated with P. falciparum sporozoite genes has been independently implicated in the regulation of T. gondii ribosomal genes [ 24].
In addition to controlling ribosomal genes, the binding site associated with this regulon is suspected to control other trophozoite-specific metabolic processes [ 25].
The σ DNA binding site associated with STM2938, the cas1-like gene, is within the upstream gene, STM2939 (539 bp from the start of STM2938).
5 Therefore, we screened the P-gp inhibitor database against the binding site associated with the removed QZ59-RRR ligand of murine P-gp protein by calculating the Gibbs free energy of binding.
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ZNF217 binding sites associated with multiple genes in TGFβ, WNT, and ER signaling pathways (gene associations are shown in Additional file 5).
Combinatorial sequence analysis of these co-regulated genes generated a hypothetical regulatory code consisting of Ets binding sites associated with a specific co-motif, ATTA.
By considering the information on the number of binding sites associated with protein adsorption as determined experimentally, and the surface positive charge distribution from the three-dimensional structure of Mab A, we hypothesized that hMabs is separated by cation exchange chromatography as the surface positive charge distribution of the VH region is recognized.
In conclusion, we have identified TR binding sites associated with 91 genes in the developing mouse cerebellum.
Twenty-one of 22 alternative sigma factor or transcription factor binding sites associated with known sRNAs were identified in our search.
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