Suggestions(5)
Exact(2)
Moreover, there is no Nur77 binding sequence in a 4-Kb region of NFATc1 promoter.
These show that the THAP domain interacts with its binding sequence in a bipartite manner, through the major and minor grooves of the DNA.
Similar(58)
Promoters of Xenopus Vent genes, however, contain conserved consensus Lef/Tcf binding sequences in a more proximal position (−65/−59 in Xvent-1B promoter and −76/−70 in Xvent-2B promoter, respectively) (Fig. 4A).
The Promoter Analysis and Interaction Network Toolset (PAINT, v 3.6) identifies common upstream transcription factor binding sequences in a list of genes and compares the prevalence of sequences within the set to that expected to be found by chance in a given list of transcription regulatory elements (TREs) http://www.dbi.tju.edu/dbi/tools/paint/[ 20, 21].
Recently, it is reported that a KSHV cis-acting DNA element within the LUR (long unique region) can initiate the replication of plasmids lacking a eukaryotic replication origin or LANA-binding sequence in a cellular pre-RC-dependent manner, indicating the existence of a novel functional origin independent of trans-acting viral proteins [ 115].
Two different 21 amino acid peptides were designed to have a DNA binding sequence in combination with a transglutaminase substrate site or a nuclear localization site.
To verify this assumption and to facilitate the determination of the consensus ArcA -P) binding sequence in S. oneidensis, ArcA -Prophoretic motility shift assay (EMSA) was used to examine the ArcA(-P) binding activity of upsequenceequences of selected operons winh purified ArcA proteinS.
The presence of a FoxO binding sequence in the miR-106b~25 genomic locus raises the possibility of an interaction between this miRNA cluster and the insulin/IGF-FoxO pathway in mammals.
As it is stated above, the variant generates an Ets-1 consensus binding sequence in PAI-1 promoter gene with an increase in the transcription rate [ 33].
Using miRNA target prediction software [ 1], we identified a potential miR-146a binding sequence in the 3' UTR of Smad4.
The predicted NF-κB binding sequence in the human PIK3CA promoter was further tested using gel shift assay.
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