Sentence examples for binding regions with a from inspiring English sources

We used the Gibbs Motif Sampler of the CisGenome program to identify novel AR binding motifs in the AR binding regions with a likelihood (LR) ratio of 500 compared to IGG ChIP-Seq background.

Actually, the roX1 and roX2 loci, which may be acting as nucleation centers for DCC formation [ 62], lack motifs, although they are surrounded by "low affinity" DCC binding regions with a high density of them.

Using the SISSRs (Site Identification from Short Sequence Reads) ChIP-seq analysis program [ 25], we identified a total of 4,883 SOX2 binding regions with a P value < 0.01 using IgG control ChIP-seq data as the negative control (Additional File 1).

The original analysis of the ChIP-seq data set [3] produced 41582 binding regions with an average size of about 1kb.

A comparison of the complete protein sequence with other laccases indicated high similarity to basidiomycete laccases, especially in the copper binding regions, with all His and Cys residues conserved.

The pattern is also very similar for "nucleotide phosphate binding region", with a clear peak of high ribosomal occupancy (slow translation) around the first ~25 nucleotides of the mRNA regions coding for this feature, although in this case the decay of the peak is sharper than for mRNA structure.

Given all these data, we think MrkH has two separate DNA-binding regions, with a smaller one on N-terminal domain and a larger one on PilZ domain (Fig. 1F).

Interestingly, DnaA-binding regions with a high A value are generally located near oriC in all the bacteria examined.

Since FAs with longer hydrophobic chains (C16 and above) activated the proton transport of neuronal UCPs more strongly than shorter chain FAs (C12 and below), it is plausible that specific FA-binding regions, with a threshold hydrophobicity, exists in UCPs.

Such data make it feasible to identify protein binding regions with high positional resolution on a genomic scale.

A selection of twelve binding regions with different features were tested.