Sentence examples for binding pocket is computed from inspiring English sources

The best ligand orientation and conformation inside the binding pocket is computed in terms of the free energy of bind (FEB) by software, for instance the AutoDock4.2 [ 5].

Moreover, a new binding pocket is also explored.

The original models are then tweaked to include the modification of the protein sequence and the binding pocket is reexamined.

A basic RNA binding pocket is located at the intersection between the two lobes.

The binding pocket is indicated as an exclusion surface.

The positively charged binding pocket is not big enough for ANP binding.

Replacement of water from the uncomplexed binding pocket is assumed to be entropically favorable.

Docked ligand conformation, is presented with sticks and the binding pocket is shown as surface.

The negatively charged binding pocket is not big enough for ATP (Fig. 2B).

The volume of the binding pocket is 495 Å.

Four binding pockets are marked as A, B, C, and D. Another binding pocket is marked as LBD.