Sentence examples for binding peak was identified from inspiring English sources

In addition, a significant binding peak was identified at SIRT4 gene promoter in CtBP genome-wide-binding profile analysis (Supplementary Figure 3A).

A high confidence MYCN-binding peak was identified in the LFG proximal promoter that disappeared when MYCN expression was repressed by doxycycline treatment.

Potential SRC-1 binding peaks were identified using three different algorithms: MACS 1.4.1 [ 9], BayesPeak[ 10], and T-PIC [ 8].

ARF6 binding peaks were identified using ChIP-Seq analysis R (CSAR) software with parameters (backg = 10, norm = −1, test = 'Ratio', times = 1e6, digits = 2) (Muino et al., 2011).

The target genes corresponding to the TF binding peaks were identified according to PAVIS criteria by using our own scripts [ 32].

DNA binding peaks were identified by using the statistical model and methodology described at (http://chipanalysis.genomecenter.ucdavis.edu/cgi-bin/tamalpais.cgi) (Bieda et al. 2006) using stringent parameters for peak identification (98th percentile threshold and p < 0.0001).

ATF4-binding peaks were identified

In the crystal structure of the APE1 Mg2+ complex determined at 1.4 Å, a single elongated 11.55σ Fo – Fc peak was identified as the Mg2+ binding site.

The 10 kDa up-regulated peak was identified by tandem mass spectrometry as diazepam binding inhibitory protein (DBI also known as Acyl Co A binding protein (ACBP) (minimum sequence coverage 48%) and a down-regulated peak at 11 kDa was identified as FK506 binding protein 12 (FKBP12, mascot score 53).

In agreement with the low concentration of TAF7L shown in Western blots prior to differentiation, only one significant peak was identified in C3H10T1/2 cells compared to 18,672 significant TAF7L binding peaks detected after adipocyte formation.

Best matches to the Smad binding element and Tbox motifs identified by Weeder, and Foxh1 binding sites (JASPAR motif MA0479.1) for each ChIP-seq peak were identified using Perl scripts modified from the transcription factor binding site (TFBS) suite [ 85].