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The same binding pattern was observed for U36 as expected.
This was to observe binding pattern variation upon mutation induction.
Similarly, parameter of DNA duplex stability data for TFs with single-strand binding pattern is higher than that for TFs with double-strand binding pattern.
Apparently the mutation of E5D does not change this binding pattern.
Contrarily, according to our binding pattern, this residue does not have any direct interaction with CP04.
In silico docking studies predicted similar binding pattern of compound 19 on androgen receptor as hydroxyflutamide.
Molecular docking studies were also carried out to understand the binding pattern.
The binding pattern of 4i in the ligand binding site of urease is shown in Fig. 1b.
For example, the chromatin binding pattern of Dnmt3a showed negative correlation with that of the H3K4me3 (Smallwood et al., 2011).
The ligands had a similar binding pattern and superposition to that of co-crystallized ligands, thus validating the docking protocol.
In order to study the binding pattern, the binding sites of 12 selected miRNAs were mapped to HPV alignments.
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