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It is believed that these ID regions promote molecular recognition by creating large surfaces suitable for interactions with their specific protein binding partners, which is a critical component of gene regulation by transcription factors.
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Thus, besides confirming the already described interaction of YopM with RSK1 and PKN2, our screen recovered RSK2 and PKN1 as novel binding partners, which are closely related isoforms of RSK1 and PKN2.
Membrane lipids can achieve these different outcomes through different interactions with their binding partners, which are mostly proteins and/or other lipids.
An alternative interpretation for polyubiquitin K48 chain competition is that the ubiquitin chains are competing for the same binding site as the binding partners which are either ubiquitinated or non-ubiquitinated.
This is the structure of the ecdysone receptor in partner with its drosophila binding partner, which is ultraspiracle.
The binding partner, which is commonly referred to as a ligand, may consist of small organic/inorganic molecules, metals and macromolecules, such as protein or DNA.
Normalized density values above score 220 indicates positive natural selection that evolved a large number of DYNLL-binding partners, which is expected for a hub protein.
Quantification of Tspan9 expression levels on platelets may provide clues as to potential binding partners, which may be expressed at similar levels.
Finally, also using this database, users can carry out a comprehensive search on RGS4 including potential inhibitory sites and other binding partners, which might be needed for further studies.
We also identified mutations of Roc2 and Cul5 and show that they cause no overt developmental phenotype, consistent with our finding that Roc2 and Cul5 proteins are exclusive binding partners, which others have observed in human cells as well.
The multivalency of glycan display is often mirrored in their binding partners, which can organize into multimeric complexes with more than one glycan-binding site.
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