Sentence examples for binding pairs were retrieved from inspiring English sources

First, 41,013 TF-gene binding pairs were retrieved from the YEASTRACT database [ 14].

Experimental validated drug-target pairs were retrieved from HIT database [15].

From these, 2,451 potential paralog pairs were retrieved (Step 2).

Second, 168,900 TF-gene regulation pairs were retrieved from the YEASTRACT database.

The parameters were modified when unsuitable primer pairs were retrieved by the program.

Within the six candidate regions, 18 simple-sequence repeat (SSR) primer pairs were retrieved from the public database, and additional 81 primer pairs were developed.

The 12S gene sequence (305 base pairs) was retrieved in three overlapping fragments (see primers in Table 1).

Sites within 100 bp of predicted NR2E1 binding sites were retrieved from the oPOSSUM database.

The HMMER signature files (profiles) of known DNA binding domains were retrieved from Pfam [ 68].

Experimentally derived transcription factor binding sites were retrieved from TRANSFAC database 6.0 [ 24], the eukaryotic transcription factors database.

Predicted transcription factor binding sites were retrieved from MSigDB (Subramanian et al., 2005; Matys et al., 2006).