Sentence examples for binding motif is defined from inspiring English sources

In case of BsuL-CTD, the metal binding motif is defined by the stretch DQHAAQERIKYEY extending from residues.

In RNAMotifModeler, the consensus of each binding motif is defined by the following components: 1) The reference motif, a k-base RNA sequence on which the protein preferably binds; 2) Retained binding affinity despite of a one-nucleotide deviation from reference motif to the sequence of one binding sites.

Since zinc binding motifs are defined by coordinating residue type and position but typically not by specifics in connecting sequence, they can be difficult to define by algorithm.

While the optimal mode I and II 14-3-3-binding motifs were defined using phosphopeptides [ 18, 19], target sites in proteins must satisfy the specificity requirements for both 14-3-3s 14-3-3s 14-3-3s kinands thet create the sites in the first protein

The PAM2 motif is defined as an interaction interface of the MLLE domain of the poly(A -binding protein (A -bindingnd Lengauer, 2004).

TCF/Lef and VDR variant consensus motifs were defined by comparing the natural binding sites in the promoter region of several target genes (Table S2).

A single EGR1 binding motif is demonstrated at bp -301 of the human CD44 promoter.

Typically, the HSP72 binding motif can be defined by a linear sequence of 7 amino acids containing hydrophobic side groups or aromatic rings (1).

The binding motif was synthesized as previously described [32].

One group of RNA binding proteins is defined by the presence of a CCCH type zinc finger motif that directly binds to RNA.

Non-covalent protein binding of SUMO is often mediated by a conserved SUMO-interaction motif (SIM) in SUMO-binding proteins, which is defined by a hydrophobic core often flanked by acidic residues [ 22].