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Loeb, G. B. et al. Transcriptome-wide miR-155 binding map reveals widespread noncanonical microRNA targeting.
Loeb GB, Khan AA, Canner D, Hiatt JB, Shendure J, Darnell RB, et al. Transcriptome-wide miR-155 binding map reveals widespread noncanonical microRNA targeting.
SLIM-ChIP reproduces a high-resolution binding map of yeast Reb1 comparable with existing methods, yet with less input material and full compatibility with high-throughput procedures.
In addition, cells were treated with rifampicin to generate a static RNAP binding map [ 24].
This RNA binding map is consistent with strong repression and enhancement, respectively.
(C ) RNA binding map for the top 12 Esrp bound 6-mer motifs identified by SELEX-seq.
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Systematic comparison to new and published insulator binding maps shows that only SU HW) binds preferentially at LAD borders and at specific positions inside LADs, while GAF, CTCF, BEAF-32 and DWG are mostly absent from these regions.
Parametric [18F]MK-9470 binding maps were constructed, corrected for partial volume effects and analyzed using statistical parametric mapping in a combined categorical (gender) and covariate (age) design.
With modern study designs, it is possible to acquire multi-modal three-dimensional assessments of the same individuals e.g., structural, functional and quantitative magnetic resonance imaging, alongside functional and ligand binding maps with positron emission tomography.
We therefore conducted DamID experiments in Kc cells to obtain whole-genome binding maps for the five known Drosophila insulator proteins: BEAF-32, CTCF, DWG, GAF and SU HW).
Comparison to new and published binding maps for all five insulators revealed SU HW) to be the only insulator protein that preferentially binds at LAD borders and at specific positions inside LADs.
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