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Further characterization of selected potent compounds in in vitro assays designed to measure their metabolic stability and protein binding is also presented.
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The binding thermodynamic parameter, such as enthalpy difference (ΔH), and structural change for Ca2+ binding are also presented.
A highly accurate cascaded classification approach using the proposed binding site prediction method to predict CaM binding proteins in Arabidopsis thaliana is also presented.
Genes encoding proteins containing tetratrico peptide repeats, which mediate protein-protein interactions, or pentatrico peptide repeats, which are thought to mediate RNA-binding, are also present (Additional file 15).
Statistics of the binding event data are also presented graphically in Fig. 8 10.
However, since for many distant CUX1 binding sites another binding site is also present close to the transcription start site, we estimated that between 44.6% to 58.5% of gene targets would be identified on distinct promoter arrays (Table 5).
A putative ANT binding site is also present in the promoters of the YABBY genes FIL and YABBY3 and is adjacent to the binding site of the Kruppel protein that represses gene expression [ 28].
The structure reveals up to one ligand (phosphocholine) bound to a single chain of fragaceatoxin, a single binding site is also present in the echotoxin of C. tritonis.
DNA footprinting has confirmed the presence of a SlyA binding site (TTATATATTTAA) in the hlyE gene of E. coli located downstream of the transcription start site [52], and this binding site is also present in the hlyE gene of S. Typhi.
This AP-1 binding site is also present in Eps15R and Eps15b, but data about a function of these Eps15 variants in secretion are so far lacking.
The predicted AdoMet-MTase (S-adenosylmethionine (AdoMet or SAM -dependent methyltranSAM -dependentn is essentially identical between methyltransferase tropicalis domainand a conserved AdoMet bisding sitessentiallyresent identicalegion.
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