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Scanned arrays were quantile normalised separately for samples and controls, and peak calling was performed using RINGO [ 72] to identify binding intervals at different False Discovery Rates.
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We identified 6067 binding intervals at 1% FDR and over 16,000 at 25% FDR.
The published ChIP datasets also identified large numbers of binding intervals and associated genes (BDTNP = 6452 binding intervals and modENCODE = 3520 binding intervals at FDR1%, mapping to approximately 6500 and 3500 genes, respectively).
The samples were incubated for different time intervals at different RH in D2O at 50°C.
These analyses provide quantitative estimates of the benefit of different screening intervals at different ages.
The UV (Perkin Elmer) absorbance spectra were taken at various time intervals at different wavelength.
We used the reference genome sequence for each species to assess the contribution to binding conservation of sequence conservation within binding intervals and at TF-specific binding motifs.
The return is calculated as the maximum return attainable during the observation period within each interval at different frequencies.
The binding constant and binding sites number at different temperatures were measured.
Specimens undergoing natural diffusion were used for measuring the chloride binding capacity at different distance.
Ka is the binding constant at different temperature.
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